Example Visualization of Gene Clusters in Bladder Cancer

Figure 6.8 is a visualization of the most important genes (selected by their co-variance to the progression of the disease) in DNA microarray measurements in bladder cancer patients.

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Fig. 6.8 Hierarchical clustering of genes (rows) expressed in bladder cancers (columns). Yellow fields show up-regulation of genes (absolute difference in right panel, logfold change in left panel), blue fields show down-regulation of genes. (Figure by Christopher Workman using ClustArray software on data from Thykjaer et al., (2001) and postprocessing with Adobe Illustrator). (See color plate.)

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