References

Andersen, J. S., Svensson, B., & Roepstorff, P. (1996). Electrospray ionization and matrix assisted laser desorption/ionization mass spectrometry: Powerful analytical tools in recombinant protein chemistry. Nat Biotechnol, 14, 449-457.

Arnold, R. J., Karty, J. A., Ellington, A. D., & Reilly, J. P. (1999). Monitoring the growth of a bacteria culture by MALDI-MS of whole cells. Anal Chem, 71, 1990-1996.

Bairoch, A., Apweiler, R., Wu, C. H., et al. (2005). The universal protein resource (UniProt). Nucleic Acids Res, 33, D154-D159.

Bright, J., Dare, D., Edwards-Jones, V., Keys, C. L., M., McKenna, T., & Morgan, M. (2001, May 20-24). The effect of variations of sample preparation on rapid identification of bacteria by intact cell matrix assisted laser desorption/ionisation time of flight mass spectrometry. In American Society for Microbiology. Orlando, USA.

Bright, J., Dare, D., Edwards-Jones, V., Keys, C., Lunt, M., McKenna, T., Shah, H., Sutton, H. & G., W. (2002a, May 19-23). Cluster analysis of bacteria based on data obtained from intact cell matrix assisted laser desorption/ionisation time of flight mass spectrometry. In American Society for Microbiology. Salt Lake City, USA.

Bright, J., Sutton, H., Edwards-Jones, V., Dare, D., Shah, H., McKenna, T., Wells, G., Lunt, M. & Devine, D. (2002b, July 28-August 1). Rapid identification of anaerobic bacteria using matrix assisted laser desorption/ionisation time of flight mass spectrometry. In International Union of Microbiological Societies. Paris, France.

Carlson, P. & Mc Kenna, T. (2002, April 24-27). Biotyping of Arcanobacterium haemolyticum strains by matrix assisted laser desorption/ionisation time of flight mass spectrometry (MALDI-TOF-MS). In 12th European Congress of Clinical Microbiology and Infectious Diseases. Milan, Italy.

Claydon, M. A., Davey, S. N., Edwards Jones, V. & Gordon, D. B. (1996). The rapid identification of intact microorganisms using mass spectrometry. Nat Biotechnol, 14, 1584-1586.

Coales, M., Bunch, A., McKenna, T. & Batchelor, J. (2002, May 19-23). Characterisation of the Staphylococcus sciuri group by matrix assisted laser desorption/ionisation time of flight mass spectrometry. In American Society for Microbiology. Salt Lake City, USA.

Dare, D., Bright, J., Edwards-Jones, V., Keys, C., Lunt, M., McKenna, T., Morgan, M. & Shah, H. (2001, May 20-24). Rapid identification of bacteria by intact cell matrix assisted laser desorption time of flight mass spectrometry: inter-laboratory study. In American Society for Microbiology. Orlando, USA.

Dare, D., Bright, J., Edwards-Jones, V., Keys, C. L., M., McKenna, M., Shah, H., Sutton, H. & Wells, G. (2002a, May 19-23). Rapid identification of bacteria by intact cell matrix assisted laser desorption ionisation time of flight mass spectrometry. In American Society for Microbiology. Salt Lake City, USA.

Dare, D., Bright, J., Sutton, H., Edwards-Jones, V., Keys, C., Shah, H., McKenna, T., Lunt, M. & Wells, G. (2002b, July 28-August 1). Rapid identification of bacteria using matrix assisted laser desorption/ionisation time of flight mass spectrometry: a database for identification of Bacilli. In International Union of Microcrobiological Societies. Paris, France.

Dare, D., Edwards-Jones, V., Fleming, K., Keys, C., Lunt, M., Mc Kenna, T., Shah, H., Sutton, H. & M., W. (2003a, May 18-22). Rapid identification of intact bacterial cells from clinical urinary Enterobacteriaceae using matrix assisted laser desorption/ionisation time of flight mass spectrometry. In American Society for Microbiology. Washington DC, USA.

Dare, D., Sutton, H., Keys, C., Shah, H., Lunt, M. & McDowall, M. (2003b, August 27-30). Application of a MALDI-TOF mass spectral database for the rapid identification of microbes; a degree of certainty. In 6th International Meeting on Microbial Epidemiological Markers. Les Diablerets, Switzerland.

Dare, D., Sutton, H., Keys, C., Shah, H., McDowall, M. & Lunt, M. (2003c, September 1618). MALDI-TOF mass spectrometry as a tool for the rapid & specific identification of pathogens linked with homeland defence. In Mass Spectrometry in Homeland Security: Past, Present, and Future, Knoxville, USA.

Dare, D., Sutton, H., Keys, C., Shah, H., Wells, G. & McDowall, M. (2003d, June 8-12). Optimisation of a database for rapid identification of intact bacterial cells of Escherichia coli by matrix-assisted laser desorption/ionisation time-of-flight mass spectrometry. In American Society for Mass Spectrometry. Montreal, Canada.

Dare, D., Sutton, H., Keys, C., Shah, H., McDowall, M. & Lunt, M. (2004a). Exploring the potential for simultaneous rapid identification & typing of Staphylococcus aureus by matrix assisted laser desorption/ionisation time of flight mass spectrometry. Int J Med Microbiol, 294, 149-149.

Dare, D., Sutton, H., Keys, C., Shah, H., Lunt, M. & Wells, G. (2004b, May 1-4). Exploring the potential for the rapid identification of Campylobacter species using MALDI-TOF mass spectrometry. In 14th European Congress of Clinical Microbiology and Infectious Diseases. Prague, Czech Republic.

Dare, D., Sutton, H., Shah, H. & Lunt, M. (2005a, July 23-28). Taxonomical classification of bacteria by MALDI-TOF mass spectrometry. In International Union of Microbiological Societies. San Francisco, USA.

Dare, D., Sutton, H., Wang, X., Shah, H. & Lunt, M. (2005b, June 5-9). MALDI-TOF Mass spectrometry: a rapid method for bacterial identification from water samples. In American Society for Microbiology. Atlanta, USA.

Dare, D. (2006). Microbial identification using MALDI-TOF MS. In Encyclopedia of Rapid Microbiological Methods Chapter 2, Volume 3. Edited by M. J. Miller. USA: PDA and DHI publishing.

Dell, A. (1987). Fab-Mass spectrometry of carbohydrates. Adv Carbohydr Chem Biochem, 45, 19-72.

Demirev, P. A., Ho, Y. P., Ryzhov, V. & Fenselau, C. (1999). Microorganism identification by mass spectrometry and protein database searches. Anal Chem, 71, 27322738.

Domin, M. A., Welham, K. J. & Ashton, D. S. (1999). The effect of solvent and matrix combinations on the analysis of bacteria by matrix-assisted laser desorption/ionisation time-of-flight mass spectrometry. Rapid Commun Mass Spectrom, 13, 222-226.

Du, Z. M., Yang, R. F., Guo, Z. B., Song, Y. J. & Wang, J. (2002). Identification of Staphy-lococcus aureus and determination of its methicillin resistance by matrix-assisted laser desorption/ionization, time-of-flight mass spectrometry. Anal Chem, 74, 5487-5491.

English, S. E., Fjelde, S., Greenhalgh, M., McCabe, R. W., McKenna, T., Morton, L. H. G., Schmidt, B. & Sherrington, I. (2003). Laboratory and field studies on thin paint films. Int Biodeterior Biodegrad, 52, 247-253.

Evason, D. J., Claydon, M. A. & Gordon, D. B. (2000). Effects of ion mode and matrix additives in the identification of bacteria by intact cell mass spectrometry. Rapid Commun Mass Spectrom, 14, 669-672.

Fenselau, C. & Demirev, P.A. (2001). Characterization of intact microorganisms by MALDI mass spectrometry. Mass Spectrom Rev, 20, 157-171.

Hindre, T., Didelot, S., Le Pennec, J. P., Haras, D., Dufour, A. & Vallee-Rehel, K. (2003). Bacteriocin detection from whole bacteria by matrix-assisted laser desorption ionization-time of flight mass spectrometry. Appl Environ Microbiol, 69, 1051-1058.

Hofstadler, S. A., Sampath, R., Blyn, L. B. & other authors (2005). TIGER: the universal biosensor. Int J Mass Spectrom, 242, 23-41.

Holland, R. D., Wilkes, J. G., Rafii, F., Sutherland, J. B., Persons, C. C., Voorhees, K. J. & Lay, J. O. (1996). Rapid identification of intact whole bacteria based on spectral patterns using matrix-assisted laser desorption/ionization with time-of-flight mass spectrometry. Rapid Commun Mass Spectrom, 10, 1227-1232.

Jarman, K. H., Cebula, S. T., Saenz, A. J., Petersen, C. E., Valentine, N. B., Kingsley, M. T. & Wahl, K. L. (2000). An algorithm for automated bacterial identification using matrix-assisted laser desorption/ionization mass spectrometry. Anal Chem, 72, 12171223.

Karas, M. & Hillenkamp, F. (1988). Laser desorption ionization of proteins with molecular masses exceeding 10000 Daltons. Anal Chem, 60, 2299-2301.

Keys, C., Shah, H., Dare, D., Sutton, H., Lunt, M. & McDowall, M. (2003, May 10-13). Constructing and testing a novel system for the rapid identification of bacteria using MALDI-TOF-mass spectrometry. In 13th European Congress of Clinical Microbiology and Infectious Diseases. Glasgow, UK.

Keys, C. J., Dare, D. J., Sutton, H., Wells, G., Lunt, M., McKenna, T., McDowall, M. & Shah, H. N. (2004). Compilation of a MALDI-TOF mass spectral database for the rapid screening and characterisation of bacteria implicated in human infectious diseases. Infect Genet Evol, 4, 221-242.

Keys, K., Shah, H. & McKenna, T. (2000, June 11-15). Use of MALDI-TOF-MS as a means of delineating organisms in the Acinetebacter, Kingella and Moraxella complex. In American Society for Mass Spectrometry. California, USA.

Krader, P. & Emerson, D. (2004). Identification of archaea and some extremophilic bacteria using matrix-assisted laser desorption/ionization time-of-flight (MALDI-TOF) mass spectrometry. Extremophiles, 8, 259-268.

Krishnamurthy, T., Ross, P. L. & Rajamani, U. (1996). Detection of pathogenic and nonpathogenic bacteria by matrix-assisted laser desorption/ionization time-of-flight mass spectrometry. Rapid Commun Mass Spectrom, 10, 883-888.

Lancashire, L., Schmid, O., Shah, H. & Ball, G. (2005). Classification of bacterial species from proteomic data using combinatorial approaches incorporating artificial neural networks, cluster analysis and principal components analysis. Bioinformatics, 21, 21912199.

Lay, J. O. (2001). MALDI-TOF mass spectrometry of bacteria. Mass Spectrom Rev, 20, 172-194.

Lefmann, M., Honisch, C., Bocker, S., Storm, N., von Wintzingerode, F., Schlotelburg, C., Moter, A., van den Boom, D. & Gobel, U. B. (2004). Novel mass spectrometry-based tool for genotypic identification of mycobacteria. J Clin Microbiol, 42, 339-346.

Marvin, L. F., Roberts, M. A. & Fay, L. B. (2003). Matrix-assisted laser desorption/ ionization time-of-flight mass spectrometry in clinical chemistry. Clin ChimActa, 337, 11-21.

McKenna, T., Lunt, M., Dare, D., Morgan, M., Bright, J., Edwards-Jones, V. & Keys, C. (2001a, May 27-31). Rapid identification of bacteria by intact cell MALDI-TOF: inter-laboratory study. In American Society for Mass Spectrometry. Chicago, USA.

McKenna, T., Lunt, M., English, S. & Morton, G. (2001b, May 27-31). The evaluation of matrix assisted laser desorption/ionisation time of flight mass spectrometry in fungal identification. In American Society for Mass Spectrometry. Chicago, USA.

McKenna, T., Bright, J., Claydon, M., Dare, D., Edwards-Jones, V., Keys, C., Lunt, M. & Morgan, M. (2001c). The Rapid identification of microorganisms by matrix assisted laser desorption/ionisation mass spectrometry. In American Society for Microbiology. Orlando, USA.

McKenna, T., Willetts, M., Batchelor, J., Bielecka, M. & Morton, G. (2002, June 2-6). Analysis of a cyanobacterial bloom by Matrix-assisted laser desorption/ionisation time of flight mass spectrometry. In American Society for Mass Spectrometry. Orlando, USA.

Nielsen, P., Dare, D., McLachlan, M., Sutton, H., Shah, H., Lunt, M. & Sismey, A. (2005, April 2-5). Matrix assisted laser desorption/ionisation time-of-flight mass spectrometry provides fast and reliable identification of Staphylococcus haemolyticus. In 15th European Congress of Clinical Microbiology and Infectious Diseases. Copenhagen, Denmark.

Nordhoff, E., Kirpekar, F. & Roepstorff, P. (1996). Mass spectrometry of nucleic acids. Mass Spectrom Rev, 15, 67-138.

Pineda, F. J., Lin, J. S., Fenselau, C. & Demirev, P. A. (2000). Testing the significance of microorganism identification by mass spectrometry and proteome database search. Anal Chem, 72, 3739-3744.

Ross, M. M., Neihof, R. A. & Campana, J. E. (1986). Direct fatty-acid profiling of complex lipids in intact algae by fast-atom-bombardment mass-spectrometry. Anal Chim Acta, 181, 149-157.

Sutton, H., Dare, D., Bright, J., EdwardsJones, V., Keys, C., Shah, H., McKenna, T. & Lunt, M. (2002, July 28-August 1). Quality assurance testing for the rapid identification of bacteria using matrix assisted laser desorption/ionisation time of flight mass spectrometry. IUMS 2002. In International Union of Microbiological Societies. Paris, France.

Sutton, H., Dare, D., Du, Z., Keys, C., Lunt, M., McKenna, T., Shah, H. & Willetts, M. (2003, May 18-22). Development of a database for the rapid identification of Staphylococcus aureus by matrix assisted laser desorption/ionisation time of flight mass spectrometry. In American Society for Microbiology. Washington DC, USA.

Sutton, H., Dare, D., Clements, S., Kibbler, C., Johnson, E., Shah, H. & Lunt, M. (2005, July 23-28). Rapid Candida species identification; is MALDI-TOF MS the answer? In International Union of Microbiological Societies. San Francisco, USA.

Tanaka, K., Waki, H., Ido, Y., Akita, S., Yoshida, Y. & Yoshida, T. (1988). Protein and polymer analyses up to m/z 100,000 by laser ionization time-of-flight mass spectrometry. Rapid Commun Mass Spectrom, 2, 151-153.

Thuy-Trang, D., Pennella, M. S., Tang, Y. W., Stratton, C. W., McKenna, T. & Bannan, J. D. (2002). Nosocomial strain relationships assessed by genotyping and MALDI-TOF mass spectrometry. In 42nd Interscience Conference on Antimicrobial Agents and Chemotherapy. San Diego, California.

Uguen, P., Hindre, T., Didelot, S., Marty, C., Haras, D., Le Pennec, J. P., Vallee-Rehel, K. & Dufour, A. (2005). Maturation by LctT is required for biosynthesis of full-length lantibiotic lacticin 481. Appl Environ Microbiol, 71, 562-565.

Valentine, N., Wunschel, S., Wunschel, D., Petersen, C. & Wahl, K. (2005). Effect of culture conditions on microorganism identification by matrix-assisted laser desorption ionization mass spectrometry. Appl Environ Microbiol, 71, 58-64.

van Baar, B. L. M. (2000). Characterisation of bacteria by matrix-assisted laser desorption/ ionisation and electrospray mass spectrometry. FEMS Microbiol Rev, 24, 193-219.

von Wintzingerode, F., Bocker, S., Schlotelburg, C., Chiu, N. H. L., Storm, N., Jurinke, C., Cantor, C. R., Gobel, U. B. & van den Boom, D. (2002). Base-specific fragmentation of amplified 16S rRNA genes analyzed by mass spectrometry: a tool for rapid bacterial identification. Proc Natl Acad Sci U S A, 99, 7039-7044.

Wang, Z. P., Russon, L., Li, L., Roser, D. C. & Long, S. R. (1998). Investigation of spectral reproducibility in direct analysis of bacteria proteins by matrix-assisted laser desorp-tion/ionization time-of-flight mass spectroscopy. Rapid Commun Mass Spectrom, 12, 456-464.

Warscheid, B. & Fenselau, C. (2004). A targeted proteomics approach to the rapid identification of bacterial cell mixtures by matrix-assisted laser desorption/ionization mass spectrometry. Proteomics, 4, 2877-2892.

Westman, A., Huthfehre, T., Demirev, P. & Sundqvist, B. U. R. (1995). Sample morphology effects in matrix-assisted laser-desorption ionization mass-spectrometry of proteins. J Mass Spectrom, 30, 206-211.

Williams, T. L., Andrzejewski, D., Lay, J. O. & Musser, S. M. (2003). Experimental factors affecting the quality and reproducibility of MALDI TOF mass spectra obtained from whole bacteria cells. J Am Soc Mass Spectrom, 14, 342-351.

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